26.9.2016 | Ajankohtaista
Post-Doc Position
Laboratory of Biosystem Dynamics, Tampere University of Technology, Finland
The position is open from September 1st, 2016 onwards. Starting date is negotiable. Competitive salary and contract length in accordance to TUT regulations.
The applicant will work in an interdisciplinary group with experts in molecular and computational biology, biophysics, signal and image processing, and biotechnology. The LBD is involved in national and international collaborations. We have theoretical and experimental research ongoing, and our lab is equipped with state-of-the-art technology for live, single-cell biology studies.
Project background: Bacteria process information so as to bind past events to future actions, making them adaptable to environment changes. This is made possible by semi-independent, tuned small genetic circuits that differ in structure, which defines their function. Meanwhile, the internal components, e.g. the kinetics of transcription initiation of the promoters, define their efficiency.
Project aims: This project will use theoretical modelling, synthetic genes and circuits, and single-cell data from time-lapse microscopy to engineer and study small genetic circuits, i.e., their dynamics, sensitivity to external signaling, robustness to fluctuations and evolvability. Depending on the applicant’s background, he/she is expected to focus on theoretical or experimental approaches, which will then be complemented by the team.
Qualification: The successful applicant should have a PhD in Biophysics, Computational or Systems Biology, Molecular Biology, Single-Cell Biology, Biotechnology, Signal Processing, etc.
To apply: send your CV, a letter of application, and a short project proposal (1 page max.) on the topics of gene networks, gene expression, or single-cell biology to Andre Ribeiro (Email: firstname.lastname@tut.fi).
Andre S. Ribeiro, Associate Professor
PI of the Laboratory of Biosystem Dynamics
Department of Signal Processing, Tampere University of Technology
Tampere, Finland. Phone: +358 408490736
26.9.2016 | Ajankohtaista
A postdoctoral or research associate position is available at the McGill Vision Research Unit, McGill University, in Montreal which is set within a large and integrated neuroscience program. Candidates should have a strong research background in human vision research and should have established expertise in fMRI data acquisition and analyses, along with experience in retinotopic mapping. Previous experience in Matlab programming is essential. On a day-to-day basis, the candidate will be expected to work independently and will be involved in the design, programming and running of human fMRI experiments and their analyses. The current areas of interest include binocular vision, visual plasticity, suppression and colour vision. There would also be scope for the candidate to develop other research projects aligned with the broad interests of the labs .
Applicants should send their cv, research statement and the names of three referees. Enquiries may be directed to:
Professor Robert Hess Professor Kathy Mullen
26.9.2016 | Ajankohtaista
http://www.fens.org/News-Activities/Jobs/job-11121/
26.9.2016 | Ajankohtaista
PhD position in bioinformatics and systems biology available at the research group of Systems Immunology at Medicum (University of Helsinki)
A PhD student position is available at the research group of systems immunology of the University of Helsinki to join several projects (EU, Finnish Academy, Erkko foundation and Finnish Working Environment Fund) in the area of systems biology and bioinformatics related to the research fields of allergy and nanosafety.
We study the gene-environment interactions and specifically the host-microbiome interface in skin and lung physiopathology (1,2), and explore the complex network of cellular and molecular interactions involved in inflammatory disease pathogenesis. Moreover, we assess the immunomodulatory effects of engineered nanomaterials (3). In predictive nanotoxicology, the in vitro and in vivo assessment of the complex molecular effects of nanoparticles is used to characterize the mode of action of nanoparticles and to establish computational predictive models of toxicity (4). We extensively use omics technologies and systems biology approaches In all our projects.
The successful candidate has a background in statistics, bioinformatics and systems biology. Advanced use of R or equivalent programming language is also required. The PhD work will essentially consist of developing computational predictive models Inferred from the integration and analysis of large multi-layer omics data sets in close collaboration with other bioinformaticians, as well as immunologists, systems biologists and clinical experts.
The student will work mainly at the systems immunology group located in the Meilahti campus under the supervision of prof. Harri Alenius, and co-supervised by Dr. Dario Greco, leader of the systems nanosafety research group at the Institute of Biotechnology located in the Viikki campus. Funding of the PhD project is already secured from several projects until the end of 2017.
References
1. Hanski I, et al. Environmental biodiversity, human microbiota, and allergy are interrelated. Proc Natl Acad Sci U S A 2012; 109:8334-9.
2. Fyhrquist N, et al. Acinetobacter species in the skin microbiota protect against allergic sensitization and inflammation. J Allergy Clin Immunol 2014; 134:1301-9 e11.
3. Rydman EM,et al. Inhalation of rod-like carbon nanotubes causes unconventional allergic airway inflammation. Part Fibre Toxicol 2014; 11:48.
4. Fortino V, et al.. A robust and accurate method for feature selection and prioritization from multi-class OMICs data. PLoS One 2014; 9:e107801.
26.9.2016 | Ajankohtaista
Postdoctoral researcher, evolutionary genomics
The University of Oulu is an international scientific community, with 16 000 students and approximately 3 000 employees. The strenghts of the University are wide multidisciplinary study/research interests and modern research and study environment and good cooperation with international educational and research institutes. More information www.oulu.fi/english/
The following job is open in the University of Oulu:
Post-doctoral position to study evolutionary genomics of haploid life-stage in conifers in University of Oulu
A postdoctoral position for 20 months is available in the Department of Genetics and Physiology, University of Oulu, Finland to work in Dr Tanja Pyhäjärvi’s research group (https://wiki.oulu.fi/x/_DLM).
Environment
The Department of Genetics and Physiology has strong expertise and tradition in plant population genetics. Current research topics include genetics of local adaptation both in trees and Arabidopsis, genetics of speciation, conservation genetics and molecular evolution of insects. We offer a scientific environment that is enthusiastic about plant evolutionary genetics, a possibility to develop your genomics and bioinformatics skills and initiate international collaboration. The Pyhäjärvi research group is part of Biocenter Oulu and of the Population and Statistical Genomics Research Consortium which combines different population genomics research groups within the university. Within Europe, we collaborate closely with other forests geneticists via the Horizon 2020 project GenTree.
Finland is one of the most livable countries, with a high quality of life, safety and excellent education system. The successful candidate will receive full benefits provided by the University of Oulu to university employees, including free occupational health care services, and obtain access and high-quality affordable childcare services.
The project
This project investigates the evolutionary consequences of haploid selection in plants. For this purpose, we use data from Pinus sylvestris (Scots pine), a widespread coniferous tree. The main objective of the study is to evaluate the effect of haploid phase in gymnosperm evolution using both RNA-seq and genome wide polymorphism data. Gymnosperms are of special interest in understanding evolutionary consequences of different ploidy levels, as they have extensive haploid life stage compared to flowering plants. The project is part of a 5-year Academy Research Fellow project of Dr. Pyhäjärvi funded by the National Research Council of Biosciences and Environment.
Qualifications
The applicant should have a doctoral degree, recorded scientific expertise and interest in population and evolutionary genomics. Experience in bioinformatics, gene expression analysis and/or targeted sequencing is an advantage. The successful applicant will contribute to gene expression and population genetic analysis and research questions can be adjusted according to her/his interests and skills. The duties also include a small amount of teaching and supervising students. The work will be conducted in collaboration with Natural Resources Institute Finland (LUKE) and as a part of an international team who are experts in gymnosperm gene expression analysis (Jukka-Pekka Verta, FML of the Max Planck Society) and theoretical plant evolutionary genetics (Yaniv Brandvain, University of Minnesota).
Details
Starting time for the position is January 1st 2017. The salary depends on the competence of the applicant, but likely will be level 5 of the national salary scale for teaching and research staff of Finnish universities. In addition, a supplementary remuneration will be given for personal achievement and performance, the sum rising to a maximum of 46.3% of the salary scale. (The total salary is expected to be around 3,200 €/month).
Applications should consist of (1) a letter of motivation (maximum 2 pages) and (2) a CV that includes a list of publications and the contact details of at least two referees. Applications should be submitted in English using the electronic application form by September 1st, 2016
For further information please contact Academy Researcher Tanja Pyhäjärvi (tanja.pyhajarvi[at]oulu.fi) or Head of Administration Tiina Pääkkönen (tiina.paakkonen[at]oulu.fi).
26.9.2016 | Ajankohtaista
Job Description
The European Molecular Biology Laboratory (EMBL) invites you to apply for PhD positions in Heidelberg, Grenoble Hamburg, Hinxton (near Cambridge), and Monterotondo (near Rome).
Would you like to contribute your creativity to an international team of scientists from all disciplines focusing on basic research in the area of molecular life sciences?
We invite candidates with background in Biology, Chemistry, Physics, Mathematics, Computer Science, Engineering and Molecular Medicine to apply.
EMBL opens the door to your scientific career: our students have an outstanding publication record, are a vital part of our global collaborations and receive their degrees jointly with our network of excellent partner universities in 17 different countries.
Our PhD positions come with generous fellowships, including broad health care benefits and pension access.
Application Instructions
The registration deadline is 17 October 2016.
The deadline for submission of the online application is 24 October 2016.
Interviews will take place in January 2017
Additional Information
EMBL is an inclusive, equal opportunity employer offering attractive conditions and benefits appropriate to an international research organisation.
Successful candidates would start their work at EMBL latest by mid of October 2017.
26.9.2016 | Ajankohtaista
Postdoctoral researcher position (Synthetic biology & antibody technologies)
The Jeltsch Laboratory in the Translational Cancer Biology Program at the University of Helsinki is developing a new in-vitro antibody generation technology and is looking for a postdoctoral researcher to join the team. The project involves – apart from enthusiasm and dedication – the setup of novel methods and requires knowledge and experience in the areas of molecular biology (cloning, mutagenesis), E. coli genetics, protein analysis (Western, IP, ELISA) purification (basics) and cell culture (transfection). Knowledge in bioinformatics will be advantageous. The project details will be discussed in the job interview.
The postdoctoral position is for two years and can start as soon as a suitable candidate is found with a probation period, after which the candidate will replace our leading postdoc who will go on maternity leave. A prolongation thereafter is possible. The salary is based on the standard University of Helsinki salary system. The closing date for applications is September 11, 2016 and the candidate should be able to start work at the latest on September 31, 2016.
Please send your application including CV, motivation letter and names of two people who would be willing to provide references with contact information as one pdf-document tomichael@jeltsch.org with a notification “Postdoc position” in the title of the mail.
26.9.2016 | Ajankohtaista
Open Group Leader positions at the European Molecular Biology Laboratory (EMBL). The European Molecular Biology Laboratory (EMBL) is one of the highest ranked scientific research organisations in the world. The Headquarters Laboratory is located in Heidelberg (Germany), with additional sites in Grenoble (France), Hamburg (Germany), Hinxton (UK) and Monterotondo (Italy).
More information at
26.9.2016 | Ajankohtaista
POSTDOCTORAL RESEARCHER
The group of Henri Huttunen and Riikka-Liisa Uronen is seeking a motivated postdoctoral researcher for an in vivo Alzheimer’s disease project at the University of Helsinki Neuroscience
Center. Our lab specializes in molecular mechanisms of Alzheimer’s disease, developing new technologies to understand these processes. For further information please visit
http://www.mv.helsinki.fi/home/hjhuttun/
Project and responsibilities
This Academy of Finland funded project involves studying the role of a novel vasoactive peptide in Alzheimer’s disease. The successful candidate will study the development of neuropathology
in both transgenic mouse lines, as well as virally infected animals. She/he will perform histology and molecular biology analysis of the animals. He/she will also supervise Master’s/ PhD students,
prepare and publish scientific manuscripts and write grant applications.
Qualifications
A successful candidate holds a PhD in life sciences. Experience and qualification in working with rodent models is obligatory. In addition, experience in histology and biochemistry are essential.
Knowledge on neuroscience and neurodegenerative diseases will be advantageous. Salary will be based on the Universities salary scheme for teaching and research personnel.
A successful candidate is expected to start in January 2017, or according to agreement.
Application, as well as questions regarding the position, should be sent to riikkaliisa.uronen@helsinki.fi by September 30, with the subject line “open postdoc position”.
26.9.2016 | Ajankohtaista
A PHD STUDENT POSITION
Toxin-mediated perturbation of host cell signaling in bacterial infection
A PhD student position is available in the research group of Arto Pulliainen at the Institute of Biomedicine, University of Turku.
You join an ongoing research project funded by the Academy of Finland and Sigrid Jusélius Foundation (2015 – 2020). You investigate how bacterial toxins recognize and enter the human cell and how the toxins manipulate the human cell signaling to ultimately influence the disease progression. You reach the research goals with a multidisciplinary approach utilizing molecular biology, biochemistry, structural biology, cell biology, microscopy, functional genomics, proteomics and RNA-Seq. Your project contributes to the development of new and targeted approaches for the prevention and treatment of infectious diseases.
To qualify for the position, you need: 1) high motivation level, work morale and independent initiative, and 2) completed or nearly completed MSc or an equivalent degree.
Please send your application in English as a single PDF document to Arto Pulliainen (arto.pulliainen@utu.fi), 30.10.2016 at the latest. The application has to contain: i) one page motivation letter, and ii) CV with contact information of at least two references.
The start time is negotiable, but January 2017 is preferable.
The position includes a 3-month trial period.
Further information:
Arto Pulliainen, PhD, Docent/Adjunct professor
Institute of Biomedicine
University of Turku
Kiinamyllynkatu 10
FI-20520 TURKU
tel. +358 40 1586044